Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.84□□□□□ -0.03
SFTPBP07988 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 AC091607.1-201ENST00000490318 1060 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 AC104819.1-201ENST00000504587 486 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.84□□□□□ -0.03
SFTPBP07988 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.84□□□□□ -0.03
SFTPBP07988 AC012615.1-201ENST00000565797 1299 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 AC109462.3-201ENST00000573934 613 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 AC005336.2-201ENST00000593183 939 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 AL138831.2-201ENST00000606564 490 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SFTPBP07988 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SFTPBP07988 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 AL162727.3-201ENST00000635661 2787 ntBASIC14.84□□□□□ -0.03
SFTPBP07988 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SFTPBP07988 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SFTPBP07988 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
SFTPBP07988 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.83□□□□□ -0.03
SFTPBP07988 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
SFTPBP07988 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.83□□□□□ -0.03
SFTPBP07988 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SFTPBP07988 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SFTPBP07988 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.83□□□□□ -0.03
SFTPBP07988 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SFTPBP07988 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.83□□□□□ -0.04
SFTPBP07988 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 FOSL1P1-201ENST00000511041 816 ntBASIC14.83□□□□□ -0.04
SFTPBP07988 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.83□□□□□ -0.04
SFTPBP07988 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.83□□□□□ -0.04
SFTPBP07988 AC011840.4-201ENST00000578471 627 ntBASIC14.83□□□□□ -0.04
SFTPBP07988 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SFTPBP07988 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SFTPBP07988 Z69720.1-201ENST00000601483 472 ntBASIC14.83□□□□□ -0.04
SFTPBP07988 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.83□□□□□ -0.04
SFTPBP07988 AC138894.3-201ENST00000603787 634 ntBASIC14.83□□□□□ -0.04
SFTPBP07988 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.83□□□□□ -0.04
SFTPBP07988 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
SFTPBP07988 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.83□□□□□ -0.04
SFTPBP07988 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SFTPBP07988 AC046185.3-201ENST00000623228 1824 ntBASIC14.82□□□□□ -0.04
SFTPBP07988 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.82□□□□□ -0.04
SFTPBP07988 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SFTPBP07988 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SFTPBP07988 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms