Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRAP04437 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.98□□□□□ -0.33
TCRAP04437 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TCRAP04437 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TCRAP04437 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.98□□□□□ -0.33
TCRAP04437 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 TSPY15P-201ENST00000457163 923 ntBASIC12.98□□□□□ -0.33
TCRAP04437 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TCRAP04437 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.98□□□□□ -0.33
TCRAP04437 AC005332.3-201ENST00000589904 676 ntBASIC12.98□□□□□ -0.33
TCRAP04437 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.98□□□□□ -0.33
TCRAP04437 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.98□□□□□ -0.33
TCRAP04437 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 AC063926.3-201ENST00000624734 5658 ntBASIC12.98□□□□□ -0.33
TCRAP04437 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.98□□□□□ -0.33
TCRAP04437 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 MTHFR-217ENST00000641820 1569 ntBASIC12.98□□□□□ -0.33
TCRAP04437 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRAP04437 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TCRAP04437 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRAP04437 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
TCRAP04437 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 AL441883.1-201ENST00000566170 1045 ntBASIC12.97□□□□□ -0.33
TCRAP04437 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.97□□□□□ -0.33
TCRAP04437 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.97□□□□□ -0.33
TCRAP04437 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TCRAP04437 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TCRAP04437 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TCRAP04437 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.97□□□□□ -0.33
TCRAP04437 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.97□□□□□ -0.33
TCRAP04437 LINC00554-201ENST00000564841 3011 ntBASIC12.97□□□□□ -0.33
TCRAP04437 KRT8P10-201ENST00000450021 1447 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms