Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.08□□□□□ -0.64
TRACP01848 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.08□□□□□ -0.64
TRACP01848 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRACP01848 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRACP01848 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.07□□□□□ -0.64
TRACP01848 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.07□□□□□ -0.64
TRACP01848 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC11.07□□□□□ -0.64
TRACP01848 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.07□□□□□ -0.64
TRACP01848 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC11.07□□□□□ -0.64
TRACP01848 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 AC036111.1-201ENST00000533973 1582 ntBASIC11.07□□□□□ -0.64
TRACP01848 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRACP01848 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRACP01848 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TRACP01848 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 ME2P1-201ENST00000426028 1970 ntBASIC11.07□□□□□ -0.64
TRACP01848 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRACP01848 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
TRACP01848 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.06□□□□□ -0.64
TRACP01848 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 PRAL-201ENST00000624952 3286 ntBASIC11.06□□□□□ -0.64
TRACP01848 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 AL603832.2-201ENST00000566195 2125 ntBASIC11.06□□□□□ -0.64
TRACP01848 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.06□□□□□ -0.64
TRACP01848 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
TRACP01848 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TRACP01848 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRACP01848 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms