Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRACP01848 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TRACP01848 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRACP01848 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC21.74■■□□□ 1.07
TRACP01848 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRACP01848 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRACP01848 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRACP01848 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.25■□□□□ 0.99
TRACP01848 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRACP01848 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRACP01848 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRACP01848 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.92■□□□□ 0.94
TRACP01848 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRACP01848 HES6-203ENST00000409160 1600 ntTSL 2 BASIC20.75■□□□□ 0.91
TRACP01848 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRACP01848 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRACP01848 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRACP01848 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
TRACP01848 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.43■□□□□ 0.86
TRACP01848 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRACP01848 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRACP01848 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRACP01848 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
TRACP01848 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRACP01848 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRACP01848 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRACP01848 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.13■□□□□ 0.81
TRACP01848 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRACP01848 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRACP01848 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRACP01848 AL356512.1-201ENST00000607453 1739 ntBASIC20.04■□□□□ 0.8
TRACP01848 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRACP01848 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRACP01848 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRACP01848 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRACP01848 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRACP01848 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRACP01848 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRACP01848 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRACP01848 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRACP01848 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRACP01848 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRACP01848 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRACP01848 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRACP01848 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TRACP01848 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRACP01848 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRACP01848 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRACP01848 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRACP01848 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRACP01848 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRACP01848 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TRACP01848 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRACP01848 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRACP01848 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRACP01848 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.58■□□□□ 0.72
TRACP01848 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.57■□□□□ 0.72
TRACP01848 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRACP01848 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.57■□□□□ 0.72
TRACP01848 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRACP01848 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRACP01848 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRACP01848 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRACP01848 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRACP01848 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRACP01848 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRACP01848 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRACP01848 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRACP01848 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRACP01848 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRACP01848 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRACP01848 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRACP01848 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.28■□□□□ 0.68
TRACP01848 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.26■□□□□ 0.67
TRACP01848 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRACP01848 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.24■□□□□ 0.67
TRACP01848 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRACP01848 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.22■□□□□ 0.67
TRACP01848 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRACP01848 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRACP01848 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRACP01848 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.17■□□□□ 0.66
TRACP01848 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRACP01848 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRACP01848 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
TRACP01848 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TRACP01848 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRACP01848 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TRACP01848 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRACP01848 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.11■□□□□ 0.65
TRACP01848 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.08■□□□□ 0.64
TRACP01848 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRACP01848 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRACP01848 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.05■□□□□ 0.64
TRACP01848 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRACP01848 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRACP01848 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRACP01848 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRACP01848 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.99■□□□□ 0.63
TRACP01848 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms