Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 AP003097.1-201ENST00000530657 1135 ntBASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22CQ9BRL7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 AC010491.1-201ENST00000563101 2797 ntBASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 AL353807.1-201ENST00000427475 662 ntBASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 NCF1B-203ENST00000435988 1254 ntBASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 AC013268.4-201ENST00000637413 2228 ntBASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC22CQ9BRL7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 AL645728.1-201ENST00000366221 2101 ntBASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CICP13-201ENST00000422015 2789 ntBASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms