Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CGREF1Q99674 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CGREF1Q99674 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC005521.1-201ENST00000393351 872 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.22■□□□□ 0.19
CGREF1Q99674 AK4P3-201ENST00000418260 669 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 TSPY22P-201ENST00000427496 604 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CGREF1Q99674 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC092647.4-201ENST00000457211 535 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 AC093827.2-201ENST00000512654 315 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.22■□□□□ 0.19
CGREF1Q99674 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC011840.4-201ENST00000578471 627 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 AC006011.2-201ENST00000621313 1158 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 AC073912.3-201ENST00000624414 853 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.22■□□□□ 0.19
CGREF1Q99674 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGREF1Q99674 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.22■□□□□ 0.19
CGREF1Q99674 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
CGREF1Q99674 AC132938.5-201ENST00000624980 1813 ntBASIC16.22■□□□□ 0.19
CGREF1Q99674 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.21■□□□□ 0.19
CGREF1Q99674 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CGREF1Q99674 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.21■□□□□ 0.19
CGREF1Q99674 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.21■□□□□ 0.19
CGREF1Q99674 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.21■□□□□ 0.19
CGREF1Q99674 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.21■□□□□ 0.19
CGREF1Q99674 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.21■□□□□ 0.19
CGREF1Q99674 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.21■□□□□ 0.19
CGREF1Q99674 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGREF1Q99674 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CGREF1Q99674 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.21■□□□□ 0.18
CGREF1Q99674 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CGREF1Q99674 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.21■□□□□ 0.18
CGREF1Q99674 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CGREF1Q99674 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.21■□□□□ 0.18
CGREF1Q99674 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.21■□□□□ 0.18
CGREF1Q99674 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.2■□□□□ 0.18
CGREF1Q99674 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.2■□□□□ 0.18
CGREF1Q99674 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CGREF1Q99674 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
CGREF1Q99674 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CGREF1Q99674 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
CGREF1Q99674 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 KLF4P1-201ENST00000412782 1185 ntBASIC16.2■□□□□ 0.18
CGREF1Q99674 AL645929.1-201ENST00000420084 975 ntBASIC16.2■□□□□ 0.18
CGREF1Q99674 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 KRT18P57-201ENST00000443599 1254 ntBASIC16.2■□□□□ 0.18
CGREF1Q99674 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.2■□□□□ 0.18
CGREF1Q99674 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.2■□□□□ 0.18
CGREF1Q99674 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.2■□□□□ 0.18
CGREF1Q99674 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGREF1Q99674 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms