Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMTM3Q96MX0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.67□□□□□ -0.06
CMTM3Q96MX0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 IGHGP-201ENST00000390555 1178 ntBASIC14.67□□□□□ -0.06
CMTM3Q96MX0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 AL353692.3-201ENST00000407031 1396 ntBASIC14.67□□□□□ -0.06
CMTM3Q96MX0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.67□□□□□ -0.06
CMTM3Q96MX0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 HMGA1P5-201ENST00000412453 271 ntBASIC14.66□□□□□ -0.06
CMTM3Q96MX0 AC007967.3-201ENST00000434308 558 ntBASIC14.66□□□□□ -0.06
CMTM3Q96MX0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.66□□□□□ -0.06
CMTM3Q96MX0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms