Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
ITCHQ96J02 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ITCHQ96J02 AC132872.4-202ENST00000622924 2756 ntBASIC16.26■□□□□ 0.19
ITCHQ96J02 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ITCHQ96J02 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.26■□□□□ 0.19
ITCHQ96J02 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 DUX4L26-201ENST00000489078 1255 ntBASIC16.26■□□□□ 0.19
ITCHQ96J02 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.26■□□□□ 0.19
ITCHQ96J02 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.26■□□□□ 0.19
ITCHQ96J02 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.26■□□□□ 0.19
ITCHQ96J02 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.26■□□□□ 0.19
ITCHQ96J02 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.25■□□□□ 0.19
ITCHQ96J02 HYMAI-201ENST00000635591 3347 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ITCHQ96J02 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.25■□□□□ 0.19
ITCHQ96J02 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 AC006449.5-201ENST00000610658 2098 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.25■□□□□ 0.19
ITCHQ96J02 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.25■□□□□ 0.19
ITCHQ96J02 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PCDHB17P-201ENST00000539533 2393 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
ITCHQ96J02 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.25■□□□□ 0.19
ITCHQ96J02 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.25■□□□□ 0.19
ITCHQ96J02 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.25■□□□□ 0.19
ITCHQ96J02 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.25■□□□□ 0.19
ITCHQ96J02 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
ITCHQ96J02 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ITCHQ96J02 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ITCHQ96J02 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ITCHQ96J02 LINC00554-201ENST00000564841 3011 ntBASIC16.25■□□□□ 0.19
ITCHQ96J02 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ITCHQ96J02 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITCHQ96J02 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.24■□□□□ 0.19
ITCHQ96J02 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.24■□□□□ 0.19
ITCHQ96J02 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.24■□□□□ 0.19
ITCHQ96J02 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ITCHQ96J02 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms