Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.15■□□□□ 0.18
GABREP78334 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GABREP78334 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.15■□□□□ 0.18
GABREP78334 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
GABREP78334 AC069120.2-201ENST00000524091 540 ntBASIC16.15■□□□□ 0.18
GABREP78334 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
GABREP78334 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.15■□□□□ 0.18
GABREP78334 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.15■□□□□ 0.18
GABREP78334 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.15■□□□□ 0.18
GABREP78334 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GABREP78334 AL158211.3-201ENST00000607385 239 ntBASIC16.15■□□□□ 0.18
GABREP78334 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.15■□□□□ 0.18
GABREP78334 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.15■□□□□ 0.18
GABREP78334 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
GABREP78334 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.14■□□□□ 0.18
GABREP78334 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.14■□□□□ 0.18
GABREP78334 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.14■□□□□ 0.17
GABREP78334 HMGA1P7-201ENST00000406908 502 ntBASIC16.14■□□□□ 0.17
GABREP78334 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.14■□□□□ 0.17
GABREP78334 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.14■□□□□ 0.17
GABREP78334 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.14■□□□□ 0.17
GABREP78334 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.14■□□□□ 0.17
GABREP78334 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 AL139327.4-201ENST00000612362 153 ntBASIC16.14■□□□□ 0.17
GABREP78334 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.14■□□□□ 0.17
GABREP78334 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GABREP78334 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.14■□□□□ 0.17
GABREP78334 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
GABREP78334 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
GABREP78334 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.14■□□□□ 0.17
GABREP78334 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABREP78334 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GABREP78334 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 NOC2LP2-201ENST00000407594 1944 ntBASIC16.13■□□□□ 0.17
GABREP78334 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.13■□□□□ 0.17
GABREP78334 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GABREP78334 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.13■□□□□ 0.17
GABREP78334 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GABREP78334 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.13■□□□□ 0.17
GABREP78334 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.13■□□□□ 0.17
GABREP78334 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.13■□□□□ 0.17
GABREP78334 AC005412.3-201ENST00000580309 715 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms