Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PER3P56645 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.83■□□□□ 0.12
PER3P56645 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PER3P56645 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PER3P56645 AC079776.2-201ENST00000641154 1609 ntBASIC15.83■□□□□ 0.12
PER3P56645 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PER3P56645 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 YBX1P5-201ENST00000509441 847 ntBASIC15.82■□□□□ 0.12
PER3P56645 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.82■□□□□ 0.12
PER3P56645 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.82■□□□□ 0.12
PER3P56645 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PER3P56645 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.82■□□□□ 0.12
PER3P56645 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.81■□□□□ 0.12
PER3P56645 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.81■□□□□ 0.12
PER3P56645 CRYGEP-201ENST00000412192 528 ntBASIC15.81■□□□□ 0.12
PER3P56645 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.81■□□□□ 0.12
PER3P56645 FAM8A3P-201ENST00000427218 844 ntBASIC15.81■□□□□ 0.12
PER3P56645 AC007967.3-201ENST00000434308 558 ntBASIC15.81■□□□□ 0.12
PER3P56645 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.81■□□□□ 0.12
PER3P56645 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.81■□□□□ 0.12
PER3P56645 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.81■□□□□ 0.12
PER3P56645 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 AP002472.1-201ENST00000577490 586 ntBASIC15.81■□□□□ 0.12
PER3P56645 MIR4469-201ENST00000583919 79 ntBASIC15.81■□□□□ 0.12
PER3P56645 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.81■□□□□ 0.12
PER3P56645 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.81■□□□□ 0.12
PER3P56645 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PER3P56645 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms