Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH11P55287 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH11P55287 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH11P55287 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH11P55287 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH11P55287 AC096633.1-201ENST00000422446 749 ntBASIC15.65■□□□□ 0.1
CDH11P55287 MTCL1P1-201ENST00000446207 792 ntBASIC15.65■□□□□ 0.1
CDH11P55287 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH11P55287 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 AL139384.1-201ENST00000612143 3047 ntBASIC15.65■□□□□ 0.1
CDH11P55287 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH11P55287 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH11P55287 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.1
CDH11P55287 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 NSUN5P1-202ENST00000421140 1535 ntBASIC15.64■□□□□ 0.09
CDH11P55287 NSUN5P2-203ENST00000457352 1529 ntBASIC15.64■□□□□ 0.09
CDH11P55287 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDH11P55287 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 NUS1P2-201ENST00000417358 873 ntBASIC15.64■□□□□ 0.09
CDH11P55287 AC246785.2-201ENST00000432512 513 ntBASIC15.64■□□□□ 0.09
CDH11P55287 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.64■□□□□ 0.09
CDH11P55287 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.64■□□□□ 0.09
CDH11P55287 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.64■□□□□ 0.09
CDH11P55287 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CDH11P55287 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDH11P55287 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CDH11P55287 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH11P55287 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDH11P55287 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH11P55287 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 MYCLP1-201ENST00000372451 1075 ntBASIC15.63■□□□□ 0.09
CDH11P55287 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH11P55287 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH11P55287 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDH11P55287 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH11P55287 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH11P55287 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms