Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDGFAP04085 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDGFAP04085 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFAP04085 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDGFAP04085 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 AL096828.2-201ENST00000567259 1965 ntBASIC15.96■□□□□ 0.15
PDGFAP04085 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 AC135776.1-201ENST00000319817 2481 ntBASIC15.96■□□□□ 0.15
PDGFAP04085 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
PDGFAP04085 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 AP002414.1-201ENST00000391405 1147 ntBASIC15.96■□□□□ 0.15
PDGFAP04085 LINC00982-205ENST00000420957 435 ntBASIC15.96■□□□□ 0.15
PDGFAP04085 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.96■□□□□ 0.15
PDGFAP04085 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PDGFAP04085 AC093512.1-201ENST00000617969 520 ntBASIC15.96■□□□□ 0.15
PDGFAP04085 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.96■□□□□ 0.15
PDGFAP04085 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.96■□□□□ 0.15
PDGFAP04085 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PDGFAP04085 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFAP04085 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDGFAP04085 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.96■□□□□ 0.14
PDGFAP04085 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.96■□□□□ 0.14
PDGFAP04085 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDGFAP04085 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDGFAP04085 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PDGFAP04085 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.95■□□□□ 0.14
PDGFAP04085 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PDGFAP04085 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.95■□□□□ 0.14
PDGFAP04085 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.95■□□□□ 0.14
PDGFAP04085 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PDGFAP04085 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.95■□□□□ 0.14
PDGFAP04085 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PDGFAP04085 AC004461.1-201ENST00000412461 403 ntBASIC15.95■□□□□ 0.14
PDGFAP04085 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.95■□□□□ 0.14
PDGFAP04085 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 BCRP1-201ENST00000444246 691 ntBASIC15.95■□□□□ 0.14
PDGFAP04085 ACTG1P14-201ENST00000446382 1122 ntBASIC15.95■□□□□ 0.14
PDGFAP04085 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.95■□□□□ 0.14
PDGFAP04085 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.95■□□□□ 0.14
PDGFAP04085 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.95■□□□□ 0.14
PDGFAP04085 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.95■□□□□ 0.14
PDGFAP04085 AL513210.1-201ENST00000629608 234 ntBASIC15.95■□□□□ 0.14
PDGFAP04085 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PDGFAP04085 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.95■□□□□ 0.14
PDGFAP04085 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDGFAP04085 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDGFAP04085 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDGFAP04085 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.94■□□□□ 0.14
PDGFAP04085 AC009949.1-201ENST00000623048 1830 ntBASIC15.94■□□□□ 0.14
PDGFAP04085 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDGFAP04085 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.94■□□□□ 0.14
PDGFAP04085 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms