Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 Z99916.3-201ENST00000623422 1080 ntBASIC18.12■□□□□ 0.49
RCCD1A6NED2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 AP002414.1-201ENST00000391405 1147 ntBASIC18.11■□□□□ 0.49
RCCD1A6NED2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 ACTG1P4-201ENST00000425123 1122 ntBASIC18.11■□□□□ 0.49
RCCD1A6NED2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 BNIP3P18-201ENST00000593976 575 ntBASIC18.11■□□□□ 0.49
RCCD1A6NED2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 AC006538.1-201ENST00000567905 1585 ntBASIC18.11■□□□□ 0.49
RCCD1A6NED2 MTHFR-217ENST00000641820 1569 ntBASIC18.11■□□□□ 0.49
RCCD1A6NED2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RCCD1A6NED2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RCCD1A6NED2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 AC233702.3-201ENST00000578656 1387 ntBASIC18.1■□□□□ 0.49
RCCD1A6NED2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 RCN1P2-201ENST00000398357 915 ntBASIC18.1■□□□□ 0.49
RCCD1A6NED2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 RN7SL850P-201ENST00000579959 291 ntBASIC18.1■□□□□ 0.49
RCCD1A6NED2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RCCD1A6NED2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.1■□□□□ 0.49
RCCD1A6NED2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms