Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AC063952.2-201ENST00000498792 1227 ntBASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AC009533.2-201ENST00000543664 586 ntBASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MRPS28Q9Y2Q9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
MRPS28Q9Y2Q9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 PCDHB17P-201ENST00000539533 2393 ntBASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 TUBB8P12-201ENST00000308911 1335 ntBASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 TUBB7P-202ENST00000428444 1305 ntBASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 TUBB8P7-204ENST00000567960 1332 ntBASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPS28Q9Y2Q9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms