Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 LINC02199-201ENST00000506655 2702 ntBASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 AC132938.5-201ENST00000624980 1813 ntBASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 KLF4P1-201ENST00000412782 1185 ntBASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 AL845331.1-201ENST00000424978 1190 ntBASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 AD001527.2-201ENST00000622994 785 ntBASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 NFIC-211ENST00000641145 8399 ntBASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
CDC42SE2Q9NRR3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AL391256.1-201ENST00000443260 1855 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 KRT18P57-201ENST00000443599 1254 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AC011498.5-201ENST00000592027 486 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AL139384.1-201ENST00000612143 3047 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 AC008741.2-201ENST00000612792 3115 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CICP6-201ENST00000457191 2729 ntBASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE2Q9NRR3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms