Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP1Q8TDR0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 AC079776.2-201ENST00000641154 1609 ntBASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 NUS1P1-201ENST00000446295 882 ntBASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 AC132008.2-207ENST00000454517 770 ntBASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP1Q8TDR0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AL121772.3-201ENST00000610840 674 ntBASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AP005117.1-201ENST00000584346 1413 ntBASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAF3IP1Q8TDR0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 AP001269.4-201ENST00000609611 512 ntBASIC17.78■□□□□ 0.44
TRAF3IP1Q8TDR0 AL732292.2-201ENST00000609649 430 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms