Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 AC092919.2-201ENST00000623631 1645 ntBASIC20.5■□□□□ 0.87
RFX7Q2KHR2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 FAM185BP-201ENST00000443595 716 ntBASIC20.5■□□□□ 0.87
RFX7Q2KHR2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 RFPL4AP1-201ENST00000530883 850 ntBASIC20.5■□□□□ 0.87
RFX7Q2KHR2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.5■□□□□ 0.87
RFX7Q2KHR2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 AC074386.1-202ENST00000463561 864 ntBASIC20.49■□□□□ 0.87
RFX7Q2KHR2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RFX7Q2KHR2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 AL513210.1-201ENST00000629608 234 ntBASIC20.48■□□□□ 0.87
RFX7Q2KHR2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.48■□□□□ 0.87
RFX7Q2KHR2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 CEND1P1-201ENST00000451006 455 ntBASIC20.47■□□□□ 0.87
RFX7Q2KHR2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 AP000344.2-201ENST00000512987 629 ntBASIC20.47■□□□□ 0.87
RFX7Q2KHR2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 PCDHB17P-201ENST00000539533 2393 ntBASIC20.47■□□□□ 0.87
RFX7Q2KHR2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 AC129492.6-201ENST00000611383 1305 ntBASIC20.47■□□□□ 0.87
RFX7Q2KHR2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 AC078925.2-201ENST00000624013 1973 ntBASIC20.47■□□□□ 0.87
RFX7Q2KHR2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX7Q2KHR2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms