Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFC1P35251 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFC1P35251 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 AC099398.1-201ENST00000567919 2776 ntBASIC17.99■□□□□ 0.47
RFC1P35251 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFC1P35251 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFC1P35251 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.99■□□□□ 0.47
RFC1P35251 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.99■□□□□ 0.47
RFC1P35251 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 AC025062.2-201ENST00000605477 670 ntBASIC17.99■□□□□ 0.47
RFC1P35251 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFC1P35251 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.99■□□□□ 0.47
RFC1P35251 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.99■□□□□ 0.47
RFC1P35251 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.99■□□□□ 0.47
RFC1P35251 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFC1P35251 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.98■□□□□ 0.47
RFC1P35251 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.98■□□□□ 0.47
RFC1P35251 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.98■□□□□ 0.47
RFC1P35251 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.98■□□□□ 0.47
RFC1P35251 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RFC1P35251 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.98■□□□□ 0.47
RFC1P35251 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RFC1P35251 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.98■□□□□ 0.47
RFC1P35251 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFC1P35251 RNF216P1-203ENST00000404404 2427 ntBASIC17.98■□□□□ 0.47
RFC1P35251 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.98■□□□□ 0.47
RFC1P35251 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RFC1P35251 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.97■□□□□ 0.47
RFC1P35251 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RFC1P35251 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.97■□□□□ 0.47
RFC1P35251 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RFC1P35251 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.97■□□□□ 0.47
RFC1P35251 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RFC1P35251 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFC1P35251 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
RFC1P35251 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RFC1P35251 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.96■□□□□ 0.47
RFC1P35251 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.96■□□□□ 0.47
RFC1P35251 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.96■□□□□ 0.47
RFC1P35251 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.96■□□□□ 0.47
RFC1P35251 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.96■□□□□ 0.47
RFC1P35251 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RFC1P35251 AC139887.3-201ENST00000568585 713 ntBASIC17.96■□□□□ 0.47
RFC1P35251 AL139424.1-201ENST00000607572 797 ntBASIC17.96■□□□□ 0.47
RFC1P35251 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.96■□□□□ 0.47
RFC1P35251 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFC1P35251 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms