Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.78■□□□□ 0.6
GAP43P17677 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.78■□□□□ 0.6
GAP43P17677 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
GAP43P17677 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.78■□□□□ 0.6
GAP43P17677 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.78■□□□□ 0.6
GAP43P17677 AL121894.2-201ENST00000602977 491 ntBASIC18.78■□□□□ 0.6
GAP43P17677 REXO1L3P-201ENST00000622202 1288 ntBASIC18.78■□□□□ 0.6
GAP43P17677 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
GAP43P17677 PCDHB17P-201ENST00000539533 2393 ntBASIC18.78■□□□□ 0.6
GAP43P17677 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GAP43P17677 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GAP43P17677 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAP43P17677 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.78■□□□□ 0.6
GAP43P17677 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GAP43P17677 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.77■□□□□ 0.6
GAP43P17677 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GAP43P17677 MRPL20P1-201ENST00000400819 433 ntBASIC18.77■□□□□ 0.6
GAP43P17677 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GAP43P17677 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GAP43P17677 AC098831.1-202ENST00000438821 336 ntBASIC18.77■□□□□ 0.6
GAP43P17677 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GAP43P17677 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GAP43P17677 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.77■□□□□ 0.6
GAP43P17677 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.77■□□□□ 0.6
GAP43P17677 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.77■□□□□ 0.6
GAP43P17677 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAP43P17677 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
GAP43P17677 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GAP43P17677 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GAP43P17677 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GAP43P17677 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.77■□□□□ 0.59
GAP43P17677 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GAP43P17677 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GAP43P17677 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.77■□□□□ 0.59
GAP43P17677 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.76■□□□□ 0.59
GAP43P17677 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.76■□□□□ 0.59
GAP43P17677 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.76■□□□□ 0.59
GAP43P17677 AC108073.2-201ENST00000464002 357 ntBASIC18.76■□□□□ 0.59
GAP43P17677 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GAP43P17677 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 PCDHA12-202ENST00000613593 2588 ntBASIC18.76■□□□□ 0.59
GAP43P17677 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GAP43P17677 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAP43P17677 AC129492.6-201ENST00000611383 1305 ntBASIC18.75■□□□□ 0.59
GAP43P17677 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
GAP43P17677 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GAP43P17677 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
GAP43P17677 AC106886.4-201ENST00000623557 2502 ntBASIC18.75■□□□□ 0.59
GAP43P17677 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms