Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NDUFS3O75489 SART3-203ENST00000546611 1184 ntBASIC17.03■□□□□ 0.32
NDUFS3O75489 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.03■□□□□ 0.32
NDUFS3O75489 MTDHP4-201ENST00000600287 670 ntBASIC17.03■□□□□ 0.32
NDUFS3O75489 AL353135.1-201ENST00000606729 504 ntBASIC17.03■□□□□ 0.32
NDUFS3O75489 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.03■□□□□ 0.32
NDUFS3O75489 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NDUFS3O75489 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NDUFS3O75489 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NDUFS3O75489 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 AKR1C7P-201ENST00000305623 895 ntBASIC17.02■□□□□ 0.32
NDUFS3O75489 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.02■□□□□ 0.32
NDUFS3O75489 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.02■□□□□ 0.32
NDUFS3O75489 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NDUFS3O75489 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDUFS3O75489 AL589182.2-201ENST00000619332 1049 ntBASIC17.02■□□□□ 0.32
NDUFS3O75489 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDUFS3O75489 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDUFS3O75489 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDUFS3O75489 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NDUFS3O75489 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.02■□□□□ 0.31
NDUFS3O75489 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NDUFS3O75489 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.02■□□□□ 0.31
NDUFS3O75489 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
NDUFS3O75489 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.01■□□□□ 0.31
NDUFS3O75489 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.01■□□□□ 0.31
NDUFS3O75489 AC139887.3-201ENST00000568585 713 ntBASIC17.01■□□□□ 0.31
NDUFS3O75489 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NDUFS3O75489 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NDUFS3O75489 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NDUFS3O75489 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NDUFS3O75489 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NDUFS3O75489 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17■□□□□ 0.31
NDUFS3O75489 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
NDUFS3O75489 AL590787.1-201ENST00000568856 1315 ntBASIC17■□□□□ 0.31
NDUFS3O75489 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NDUFS3O75489 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDUFS3O75489 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
NDUFS3O75489 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDUFS3O75489 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17■□□□□ 0.31
NDUFS3O75489 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDUFS3O75489 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDUFS3O75489 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms