Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 HCG4P8-203ENST00000443049 980 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 LINC00265-3P-201ENST00000447588 903 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 MIR3180-1-201ENST00000580374 94 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 MIR3180-3-201ENST00000584616 94 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 AC092119.3-201ENST00000612618 583 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 AC018695.7-201ENST00000624587 2492 ntBASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.23□□□□□ -0.13
LIN7CQ9NUP9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC233702.3-201ENST00000578656 1387 ntBASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC092053.1-201ENST00000605787 1936 ntBASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC012615.1-201ENST00000565797 1299 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms