Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.62□□□□□ -0.553e-8■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.62□□□□□ -0.553e-8■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.553e-8■■□□□ 11.5
CSTF2TQ9H0L4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.12■■□□□ 1.938e-11■■□□□ 11.5
CSTF2TQ9H0L4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.86■■□□□ 1.898e-11■■□□□ 11.5
CSTF2TQ9H0L4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.56■■□□□ 1.848e-11■■□□□ 11.5
CSTF2TQ9H0L4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.56■■□□□ 1.848e-11■■□□□ 11.5
CSTF2TQ9H0L4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.04■□□□□ 0.648e-11■■□□□ 11.5
CSTF2TQ9H0L4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.84■□□□□ 0.132e-9■■□□□ 11.5
CSTF2TQ9H0L4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.012e-9■■□□□ 11.5
CSTF2TQ9H0L4 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.521e-46■■□□□ 11.5
CSTF2TQ9H0L4 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.641e-46■■□□□ 11.5
CSTF2TQ9H0L4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.32■□□□□ 0.522e-6■■□□□ 11.5
CSTF2TQ9H0L4 POFUT2-205ENST00000460932 616 ntTSL 215.5■□□□□ 0.072e-6■■□□□ 11.5
CSTF2TQ9H0L4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.83□□□□□ -0.042e-6■■□□□ 11.5
CSTF2TQ9H0L4 ZNF276-204ENST00000562530 1826 ntTSL 214.63□□□□□ -0.072e-6■■□□□ 11.5
CSTF2TQ9H0L4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.49□□□□□ -0.092e-6■■□□□ 11.5
CSTF2TQ9H0L4 POFUT2-208ENST00000471540 3176 ntTSL 511.77□□□□□ -0.532e-6■■□□□ 11.5
CSTF2TQ9H0L4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.33e-7■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-210ENST00000582473 584 ntTSL 319.85■□□□□ 0.772e-6■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 519.32■□□□□ 0.682e-6■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.88■□□□□ 0.132e-6■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.282e-6■■□□□ 11.5
CSTF2TQ9H0L4 GPRC5C-209ENST00000582444 550 ntTSL 49.18□□□□□ -0.942e-6■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-206ENST00000585695 1121 ntTSL 221.45■■□□□ 1.026e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-205ENST00000585636 561 ntTSL 221.45■■□□□ 1.026e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.45■■□□□ 1.026e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.816e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-216ENST00000592857 837 ntTSL 319.82■□□□□ 0.766e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.646e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-210ENST00000588315 1409 ntTSL 218.81■□□□□ 0.66e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-209ENST00000588049 839 ntTSL 518.47■□□□□ 0.556e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-204ENST00000585523 574 ntTSL 418.47■□□□□ 0.556e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.436e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-208ENST00000586633 566 ntTSL 316.74■□□□□ 0.276e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.69□□□□□ -0.066e-10■■□□□ 11.5
CSTF2TQ9H0L4 SLC25A39-214ENST00000591151 636 ntTSL 213.71□□□□□ -0.216e-10■■□□□ 11.5
CSTF2TQ9H0L4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.91■□□□□ 0.623e-9■■□□□ 11.5
CSTF2TQ9H0L4 ERICH1-207ENST00000522893 3170 ntAPPRIS ALT2 TSL 1 (best)12.41□□□□□ -0.427e-11■■□□□ 11.5
CSTF2TQ9H0L4 ERICH1-208ENST00000523053 735 ntTSL 212.38□□□□□ -0.437e-11■■□□□ 11.5
CSTF2TQ9H0L4 PACSIN2-207ENST00000422336 664 ntTSL 511.39□□□□□ -0.591e-6■■□□□ 11.5
CSTF2TQ9H0L4 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.76□□□□□ -0.695e-6■■□□□ 11.5
CSTF2TQ9H0L4 CERK-202ENST00000443629 1760 ntTSL 1 (best)20■□□□□ 0.799e-7■■□□□ 11.5
CSTF2TQ9H0L4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.039e-7■■□□□ 11.5
CSTF2TQ9H0L4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.31■□□□□ 0.042e-6■■□□□ 11.5
CSTF2TQ9H0L4 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.517e-7■■□□□ 11.5
CSTF2TQ9H0L4 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.727e-7■■□□□ 11.5
CSTF2TQ9H0L4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.271e-7■■□□□ 11.5
CSTF2TQ9H0L4 FSCN1-205ENST00000473330 2215 ntTSL 218.96■□□□□ 0.633e-7■■□□□ 11.5
CSTF2TQ9H0L4 EPAS1-202ENST00000449347 1067 ntTSL 317.85■□□□□ 0.452e-7■■□□□ 11.5
CSTF2TQ9H0L4 EPAS1-207ENST00000467888 665 ntTSL 517.66■□□□□ 0.422e-7■■□□□ 11.5
CSTF2TQ9H0L4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.182e-7■■□□□ 11.5
CSTF2TQ9H0L4 EPAS1-203ENST00000460015 558 ntTSL 413.36□□□□□ -0.272e-7■■□□□ 11.5
CSTF2TQ9H0L4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.161e-6■■□□□ 11.5
CSTF2TQ9H0L4 TCAF1-204ENST00000478172 576 ntTSL 410.11□□□□□ -0.791e-6■■□□□ 11.5
CSTF2TQ9H0L4 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.031e-6■■□□□ 11.5
CSTF2TQ9H0L4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.092e-6■■□□□ 11.5
CSTF2TQ9H0L4 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)18.89■□□□□ 0.611e-9■■□□□ 11.5
CSTF2TQ9H0L4 MGAT4B-217ENST00000521305 1213 ntTSL 517.37■□□□□ 0.374e-8■■□□□ 11.5
CSTF2TQ9H0L4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.31□□□□□ -1.564e-13■■□□□ 11.5
CSTF2TQ9H0L4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.726e-8■■□□□ 11.5
CSTF2TQ9H0L4 NDUFA13-202ENST00000502506 1166 ntTSL 214.71□□□□□ -0.051e-18■■□□□ 11.5
CSTF2TQ9H0L4 NDUFA13-207ENST00000606722 502 ntTSL 311.87□□□□□ -0.511e-18■■□□□ 11.5
CSTF2TQ9H0L4 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-18■■□□□ 11.5
CSTF2TQ9H0L4 PLXNB2-202ENST00000411680 704 ntTSL 215.83■□□□□ 0.121e-7■■□□□ 11.4
CSTF2TQ9H0L4 PLXNB2-212ENST00000496720 913 ntTSL 315.21■□□□□ 0.031e-7■■□□□ 11.4
CSTF2TQ9H0L4 MVD-203ENST00000562651 908 ntTSL 219.02■□□□□ 0.643e-7■■□□□ 11.4
CSTF2TQ9H0L4 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.21□□□□□ -0.934e-8■■□□□ 11.4
CSTF2TQ9H0L4 SEMA4C-206ENST00000482925 3776 ntTSL 212.65□□□□□ -0.381e-10■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-210ENST00000484996 1369 ntTSL 319.21■□□□□ 0.677e-8■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.227e-8■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-211ENST00000489818 683 ntTSL 39.59□□□□□ -0.877e-8■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-207ENST00000463851 939 ntTSL 39.34□□□□□ -0.917e-8■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-206ENST00000462444 793 ntTSL 28.54□□□□□ -1.047e-8■■□□□ 11.4
CSTF2TQ9H0L4 GLUL-209ENST00000480604 908 ntTSL 57.97□□□□□ -1.137e-8■■□□□ 11.4
CSTF2TQ9H0L4 XPO1-215ENST00000468259 600 ntTSL 56.47□□□□□ -1.373e-11■■□□□ 11.4
CSTF2TQ9H0L4 XPO1-218ENST00000476585 342 ntTSL 26.45□□□□□ -1.383e-11■■□□□ 11.4
CSTF2TQ9H0L4 XPO1-208ENST00000437159 537 ntTSL 55.61□□□□□ -1.513e-11■■□□□ 11.4
CSTF2TQ9H0L4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.556e-7■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.86■□□□□ 0.455e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.83■□□□□ 0.445e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.59■□□□□ 0.255e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-210ENST00000427710 589 ntTSL 413.92□□□□□ -0.185e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13□□□□□ -0.335e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-211ENST00000438462 656 ntTSL 510.83□□□□□ -0.685e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.29□□□□□ -1.085e-12■■□□□ 11.4
CSTF2TQ9H0L4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.875e-12■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-206ENST00000585508 760 ntTSL 518.01■□□□□ 0.471e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.421e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.42■□□□□ 0.381e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.141e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.64■□□□□ 0.11e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-210ENST00000590236 616 ntTSL 315.01□□□□□ -0.011e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.4□□□□□ -0.261e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-209ENST00000587151 582 ntTSL 513.28□□□□□ -0.281e-9■■□□□ 11.4
CSTF2TQ9H0L4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-9■■□□□ 11.4
CSTF2TQ9H0L4 FAM171A1-202ENST00000455654 605 ntTSL 315.78■□□□□ 0.124e-7■■□□□ 11.4
CSTF2TQ9H0L4 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.014e-7■■□□□ 11.4
CSTF2TQ9H0L4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.432e-7■■□□□ 11.4
Retrieved 100 of 19,151 protein–RNA pairs in 140.8 ms