Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
DYNC2LI1Q8TCX1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DYNC2LI1Q8TCX1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TUBB7P-202ENST00000428444 1305 ntBASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DYNC2LI1Q8TCX1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
DYNC2LI1Q8TCX1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
DYNC2LI1Q8TCX1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
DYNC2LI1Q8TCX1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
DYNC2LI1Q8TCX1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 AC023908.3-201ENST00000564211 3047 ntBASIC15.08■□□□□ 0
DYNC2LI1Q8TCX1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms