Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 VN2R19P-201ENST00000442399 1052 ntBASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 AP000344.2-201ENST00000512987 629 ntBASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 AC027612.4-201ENST00000605371 583 ntBASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 ACTL9-202ENST00000612068 1252 ntBASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKX2-3Q8TAU0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 AC005915.1-201ENST00000624912 2018 ntBASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 PCDHB17P-201ENST00000539533 2393 ntBASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NKX2-3Q8TAU0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 AC004449.1-201ENST00000564240 433 ntBASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-3Q8TAU0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 AC063926.2-201ENST00000623766 1308 ntBASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 ACTG1P14-201ENST00000446382 1122 ntBASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 MIR4751-201ENST00000578027 74 ntBASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 AC010507.1-201ENST00000633895 436 ntBASIC20.09■□□□□ 0.81
NKX2-3Q8TAU0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms