Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 MRPS18AP1-201ENST00000414458 589 ntBASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 SERBP1P5-201ENST00000510079 1181 ntBASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 CR383656.12-201ENST00000549567 513 ntBASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 TOP3BP1-201ENST00000420768 1380 ntBASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCP2Q5VXM1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 AL358472.5-202ENST00000641448 1267 ntBASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCP2Q5VXM1 AC009113.1-201ENST00000570267 2443 ntBASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 TSSK5P-201ENST00000423978 907 ntBASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 SPDYE22P-201ENST00000582158 798 ntBASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 AC027307.3-201ENST00000594262 1100 ntBASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 AC073592.8-201ENST00000624126 511 ntBASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDCP2Q5VXM1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 AC016027.1-202ENST00000607927 1699 ntBASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms