Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 AL121672.3-201ENST00000608644 468 ntBASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 AD001527.2-201ENST00000622994 785 ntBASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 AC073592.5-201ENST00000624854 528 ntBASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6AP1LQ52LC2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AC079328.2-201ENST00000561241 3354 ntBASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6AP1LQ52LC2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 RCN1P1-201ENST00000400413 996 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 TMPOP1-202ENST00000424642 1267 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AC091607.1-201ENST00000490318 1060 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AP002490.2-201ENST00000524791 560 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 NTF6B-201ENST00000591913 560 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6AP1LQ52LC2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6AP1LQ52LC2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP6AP1LQ52LC2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6AP1LQ52LC2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6AP1LQ52LC2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms