Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH8P55286 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDH8P55286 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH8P55286 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 HCG4B-203ENST00000450128 991 ntBASIC18.19■□□□□ 0.5
CDH8P55286 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.19■□□□□ 0.5
CDH8P55286 POLD2P1-201ENST00000511220 997 ntBASIC18.19■□□□□ 0.5
CDH8P55286 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 AC064836.3-201ENST00000607928 673 ntBASIC18.19■□□□□ 0.5
CDH8P55286 AC010654.1-201ENST00000615722 808 ntBASIC18.19■□□□□ 0.5
CDH8P55286 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH8P55286 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDH8P55286 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH8P55286 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH8P55286 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH8P55286 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH8P55286 REXO1L3P-201ENST00000622202 1288 ntBASIC18.18■□□□□ 0.5
CDH8P55286 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH8P55286 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH8P55286 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH8P55286 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH8P55286 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH8P55286 AC107918.2-201ENST00000530817 355 ntBASIC18.17■□□□□ 0.5
CDH8P55286 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH8P55286 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.17■□□□□ 0.5
CDH8P55286 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 AC027601.4-201ENST00000611259 610 ntBASIC18.17■□□□□ 0.5
CDH8P55286 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH8P55286 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH8P55286 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH8P55286 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH8P55286 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms