Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
NEDD4P46934 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.05■□□□□ 0.8
NEDD4P46934 FAM197Y3-203ENST00000618346 717 ntBASIC20.05■□□□□ 0.8
NEDD4P46934 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
NEDD4P46934 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.05■□□□□ 0.8
NEDD4P46934 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEDD4P46934 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.04■□□□□ 0.8
NEDD4P46934 KRT18P3-201ENST00000451602 1288 ntBASIC20.04■□□□□ 0.8
NEDD4P46934 PGAM5P1-201ENST00000518923 814 ntBASIC20.04■□□□□ 0.8
NEDD4P46934 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.04■□□□□ 0.8
NEDD4P46934 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NEDD4P46934 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NEDD4P46934 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 SLC22A20-204ENST00000530038 1673 ntBASIC20.04■□□□□ 0.8
NEDD4P46934 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.04■□□□□ 0.8
NEDD4P46934 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NEDD4P46934 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 AL121761.2-201ENST00000598007 1648 ntBASIC20.04■□□□□ 0.8
NEDD4P46934 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NEDD4P46934 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEDD4P46934 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NEDD4P46934 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NEDD4P46934 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.03■□□□□ 0.8
NEDD4P46934 AL591424.1-201ENST00000442569 1213 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 FAM185BP-201ENST00000443595 716 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.03■□□□□ 0.8
NEDD4P46934 CXCL1P1-201ENST00000502804 216 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.03■□□□□ 0.8
NEDD4P46934 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.03■□□□□ 0.8
NEDD4P46934 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NEDD4P46934 TOP3BP1-201ENST00000420768 1380 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
NEDD4P46934 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 NKILA-202ENST00000614771 2598 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
NEDD4P46934 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.03■□□□□ 0.8
NEDD4P46934 AC105020.1-201ENST00000435356 2205 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.03■□□□□ 0.8
NEDD4P46934 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NEDD4P46934 KRT8P49-201ENST00000604166 1432 ntBASIC20.03■□□□□ 0.8
NEDD4P46934 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NEDD4P46934 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.02■□□□□ 0.8
NEDD4P46934 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
NEDD4P46934 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.02■□□□□ 0.8
NEDD4P46934 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NEDD4P46934 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NEDD4P46934 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.02■□□□□ 0.8
NEDD4P46934 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.02■□□□□ 0.8
NEDD4P46934 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.02■□□□□ 0.8
NEDD4P46934 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 AC011676.5-201ENST00000624864 2660 ntBASIC20.02■□□□□ 0.8
NEDD4P46934 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.02■□□□□ 0.8
NEDD4P46934 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms