Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SPARCP09486 AC132938.5-201ENST00000624980 1813 ntBASIC15.27■□□□□ 0.03
SPARCP09486 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.26■□□□□ 0.03
SPARCP09486 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 AC233702.3-201ENST00000578656 1387 ntBASIC15.26■□□□□ 0.03
SPARCP09486 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.26■□□□□ 0.03
SPARCP09486 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.26■□□□□ 0.03
SPARCP09486 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.26■□□□□ 0.03
SPARCP09486 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.26■□□□□ 0.03
SPARCP09486 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.26■□□□□ 0.03
SPARCP09486 AC124947.2-201ENST00000547118 1133 ntBASIC15.26■□□□□ 0.03
SPARCP09486 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.26■□□□□ 0.03
SPARCP09486 AC073592.5-201ENST00000624854 528 ntBASIC15.26■□□□□ 0.03
SPARCP09486 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.26■□□□□ 0.03
SPARCP09486 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPARCP09486 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SPARCP09486 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.25■□□□□ 0.03
SPARCP09486 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.25■□□□□ 0.03
SPARCP09486 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SPARCP09486 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SPARCP09486 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.25■□□□□ 0.03
SPARCP09486 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.25■□□□□ 0.03
SPARCP09486 TOB2P1-201ENST00000469761 992 ntBASIC15.25■□□□□ 0.03
SPARCP09486 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.25■□□□□ 0.03
SPARCP09486 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SPARCP09486 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SPARCP09486 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.25■□□□□ 0.03
SPARCP09486 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPARCP09486 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.25■□□□□ 0.03
SPARCP09486 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPARCP09486 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPARCP09486 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPARCP09486 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPARCP09486 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SPARCP09486 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPARCP09486 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPARCP09486 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.24■□□□□ 0.03
SPARCP09486 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPARCP09486 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms