Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC079776.4-201ENST00000511039 504 ntBASIC17.15■□□□□ 0.34
MMP2P08253 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP2P08253 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MMP2P08253 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP2P08253 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP2P08253 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP2P08253 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MMP2P08253 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
MMP2P08253 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MMP2P08253 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP2P08253 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MMP2P08253 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
MMP2P08253 MRPL20P1-201ENST00000400819 433 ntBASIC17.14■□□□□ 0.33
MMP2P08253 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP2P08253 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MMP2P08253 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP2P08253 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
MMP2P08253 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP2P08253 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MMP2P08253 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 IL9RP2-201ENST00000423948 1312 ntBASIC17.14■□□□□ 0.33
MMP2P08253 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP2P08253 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
MMP2P08253 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP2P08253 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.13■□□□□ 0.33
MMP2P08253 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP2P08253 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
MMP2P08253 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP2P08253 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
MMP2P08253 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
MMP2P08253 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP2P08253 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP2P08253 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms