Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.18■□□□□ 0.02
ALX3O95076 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ALX3O95076 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.17■□□□□ 0.02
ALX3O95076 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.17■□□□□ 0.02
ALX3O95076 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.17■□□□□ 0.02
ALX3O95076 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 CICP4-201ENST00000447359 2812 ntBASIC15.17■□□□□ 0.02
ALX3O95076 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ALX3O95076 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ALX3O95076 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ALX3O95076 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ALX3O95076 AP003733.1-201ENST00000491725 852 ntBASIC15.17■□□□□ 0.02
ALX3O95076 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.17■□□□□ 0.02
ALX3O95076 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.17■□□□□ 0.02
ALX3O95076 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ALX3O95076 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ALX3O95076 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ALX3O95076 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 AC116353.5-201ENST00000638148 1699 ntBASIC15.16■□□□□ 0.02
ALX3O95076 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.16■□□□□ 0.02
ALX3O95076 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.16■□□□□ 0.02
ALX3O95076 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 SPDYE15P-201ENST00000424157 909 ntBASIC15.16■□□□□ 0.02
ALX3O95076 ATP5G1P1-201ENST00000448724 379 ntBASIC15.16■□□□□ 0.02
ALX3O95076 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ALX3O95076 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.16■□□□□ 0.02
ALX3O95076 GPR32P1-201ENST00000601788 811 ntBASIC15.16■□□□□ 0.02
ALX3O95076 AL139327.4-201ENST00000612362 153 ntBASIC15.16■□□□□ 0.02
ALX3O95076 AC011558.1-201ENST00000623459 338 ntBASIC15.16■□□□□ 0.02
ALX3O95076 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ALX3O95076 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.16■□□□□ 0.02
ALX3O95076 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.16■□□□□ 0.02
ALX3O95076 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ALX3O95076 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ALX3O95076 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.15■□□□□ 0.02
ALX3O95076 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ALX3O95076 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.15■□□□□ 0.02
ALX3O95076 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.15■□□□□ 0.02
ALX3O95076 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ALX3O95076 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.15■□□□□ 0.02
ALX3O95076 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.15■□□□□ 0.02
ALX3O95076 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms