Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 AC108073.2-201ENST00000464002 357 ntBASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 ZNF259P1-201ENST00000407656 1365 ntBASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC4Q9HBW1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 AC009947.1-201ENST00000444350 727 ntBASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 SLC25A1P1-201ENST00000528351 927 ntBASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC4Q9HBW1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC4Q9HBW1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 AL022342.1-201ENST00000400363 863 ntBASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 MRPL20P1-201ENST00000400819 433 ntBASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 PAWRP1-201ENST00000451083 565 ntBASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 AC145285.3-201ENST00000564603 959 ntBASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LRRC4Q9HBW1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms