Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 AL355355.2-201ENST00000442321 338 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 AL137784.2-201ENST00000607332 1000 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 AC010240.3-201ENST00000607688 395 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 AL139327.4-201ENST00000612362 153 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 CR769767.2-201ENST00000622735 460 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 BX276092.7-203ENST00000637198 1536 ntBASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM3Q9BZL3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM3Q9BZL3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 AC092384.3-202ENST00000564646 2873 ntBASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM3Q9BZL3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMIM3Q9BZL3 AC133681.1-201ENST00000465482 601 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms