Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 AL356488.2-201ENST00000602755 427 ntBASIC18.37■□□□□ 0.53
SEMA4DQ92854 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 AC099398.1-201ENST00000567919 2776 ntBASIC18.37■□□□□ 0.53
SEMA4DQ92854 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PI4KAP1-204ENST00000612579 1703 ntBASIC18.37■□□□□ 0.53
SEMA4DQ92854 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 HLA-A-201ENST00000376802 1334 ntBASIC18.36■□□□□ 0.53
SEMA4DQ92854 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 AC087163.2-201ENST00000457299 853 ntBASIC18.36■□□□□ 0.53
SEMA4DQ92854 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 SLC25A6P2-201ENST00000497974 877 ntBASIC18.36■□□□□ 0.53
SEMA4DQ92854 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SEMA4DQ92854 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SEMA4DQ92854 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 AC117500.6-201ENST00000624871 588 ntBASIC18.35■□□□□ 0.53
SEMA4DQ92854 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SEMA4DQ92854 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 AL645728.1-201ENST00000366221 2101 ntBASIC18.35■□□□□ 0.53
SEMA4DQ92854 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA4DQ92854 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA4DQ92854 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms