Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 AC111152.3-201ENST00000569699 673 ntBASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUDCD3Q8IVD9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 AC092364.2-201ENST00000596710 2692 ntBASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 COX11P1-201ENST00000489116 835 ntBASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 AC005332.3-201ENST00000589904 676 ntBASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUDCD3Q8IVD9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 FRMD8P1-201ENST00000440433 1524 ntBASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUDCD3Q8IVD9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUDCD3Q8IVD9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms