Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ACTG1P14-201ENST00000446382 1122 ntBASIC19.02■□□□□ 0.64
TRIM50Q86XT4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AL513210.1-201ENST00000629608 234 ntBASIC19.02■□□□□ 0.64
TRIM50Q86XT4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM50Q86XT4 AC067852.2-201ENST00000590513 2313 ntBASIC19.02■□□□□ 0.64
TRIM50Q86XT4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM50Q86XT4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 ADH5P3-201ENST00000433842 1137 ntBASIC19.01■□□□□ 0.63
TRIM50Q86XT4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 AL133373.2-201ENST00000623187 2828 ntBASIC19.01■□□□□ 0.63
TRIM50Q86XT4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM50Q86XT4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 AC004461.1-201ENST00000412461 403 ntBASIC19■□□□□ 0.63
TRIM50Q86XT4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 NMU-203ENST00000507338 658 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 AP000344.2-201ENST00000512987 629 ntBASIC19■□□□□ 0.63
TRIM50Q86XT4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19■□□□□ 0.63
TRIM50Q86XT4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 AC099522.2-201ENST00000607001 744 ntBASIC19■□□□□ 0.63
TRIM50Q86XT4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 AC105339.1-204ENST00000636249 355 ntBASIC19■□□□□ 0.63
TRIM50Q86XT4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19■□□□□ 0.63
TRIM50Q86XT4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM50Q86XT4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19■□□□□ 0.63
TRIM50Q86XT4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM50Q86XT4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms