Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ATP5G2P1-201ENST00000433580 426 ntBASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 AC148477.5-201ENST00000625164 1645 ntBASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV3-43DP0DP04 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 AC105020.1-201ENST00000435356 2205 ntBASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 EGFEM1P-202ENST00000431685 1563 ntBASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 UBALD1-205ENST00000590891 2641 ntBASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
IGHV3-43DP0DP04 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV3-43DP0DP04 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms