Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LTAP01374 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LTAP01374 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LTAP01374 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LTAP01374 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LTAP01374 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.92□□□□□ -0.34
LTAP01374 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 PRORSD1P-201ENST00000295112 541 ntBASIC12.91□□□□□ -0.34
LTAP01374 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
LTAP01374 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.91□□□□□ -0.34
LTAP01374 HLA-F-220ENST00000434407 884 ntBASIC12.91□□□□□ -0.34
LTAP01374 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.91□□□□□ -0.34
LTAP01374 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.91□□□□□ -0.34
LTAP01374 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.91□□□□□ -0.34
LTAP01374 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
LTAP01374 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.91□□□□□ -0.34
LTAP01374 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LTAP01374 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LTAP01374 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 AC092850.2-201ENST00000623821 2697 ntBASIC12.9□□□□□ -0.34
LTAP01374 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LTAP01374 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.9□□□□□ -0.34
LTAP01374 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.9□□□□□ -0.34
LTAP01374 GCSHP5-201ENST00000443090 522 ntBASIC12.9□□□□□ -0.34
LTAP01374 AL158047.1-201ENST00000445918 881 ntBASIC12.9□□□□□ -0.34
LTAP01374 AC098590.1-201ENST00000468126 897 ntBASIC12.9□□□□□ -0.34
LTAP01374 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.9□□□□□ -0.34
LTAP01374 AP003733.1-201ENST00000491725 852 ntBASIC12.9□□□□□ -0.34
LTAP01374 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.9□□□□□ -0.34
LTAP01374 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 AC111152.3-201ENST00000569699 673 ntBASIC12.9□□□□□ -0.34
LTAP01374 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.9□□□□□ -0.34
LTAP01374 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.9□□□□□ -0.34
LTAP01374 Z99916.2-201ENST00000604037 246 ntBASIC12.9□□□□□ -0.34
LTAP01374 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.9□□□□□ -0.34
LTAP01374 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LTAP01374 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.9□□□□□ -0.34
LTAP01374 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms