Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
PHGDHO43175 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PHGDHO43175 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.05■□□□□ 0.32
PHGDHO43175 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 IGHV3-47-201ENST00000425060 335 ntBASIC17.05■□□□□ 0.32
PHGDHO43175 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.05■□□□□ 0.32
PHGDHO43175 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.05■□□□□ 0.32
PHGDHO43175 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PHGDHO43175 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.05■□□□□ 0.32
PHGDHO43175 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.05■□□□□ 0.32
PHGDHO43175 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PHGDHO43175 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PHGDHO43175 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHGDHO43175 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
PHGDHO43175 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
PHGDHO43175 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 AL603756.1-201ENST00000606511 2163 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 PMPCAP1-201ENST00000508114 1576 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.04■□□□□ 0.32
PHGDHO43175 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.04■□□□□ 0.32
PHGDHO43175 FAM210CP-201ENST00000445714 574 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.04■□□□□ 0.32
PHGDHO43175 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.04■□□□□ 0.32
PHGDHO43175 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.04■□□□□ 0.32
PHGDHO43175 AC074051.2-201ENST00000565115 352 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 PCDHB17P-201ENST00000539533 2393 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 PCDH8P1-201ENST00000428983 2773 ntBASIC17.04■□□□□ 0.32
PHGDHO43175 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.04■□□□□ 0.32
PHGDHO43175 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PHGDHO43175 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PHGDHO43175 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHGDHO43175 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PHGDHO43175 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHGDHO43175 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.03■□□□□ 0.32
PHGDHO43175 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHGDHO43175 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PHGDHO43175 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.03■□□□□ 0.32
PHGDHO43175 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHGDHO43175 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.03■□□□□ 0.32
PHGDHO43175 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.03■□□□□ 0.32
PHGDHO43175 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms