Protein–RNA interactions for Protein: A0A0A0MS01

TRGV10, T-cell receptor gamma variable 10 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV10A0A0A0MS01 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 SCARNA2-201ENST00000458748 420 ntBASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 MTDHP3-201ENST00000594186 672 ntBASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 CLEC4GP1-201ENST00000596555 870 ntBASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 AL121761.2-201ENST00000598007 1648 ntBASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV10A0A0A0MS01 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 GPR89P-201ENST00000407924 1495 ntBASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 AC008608.2-201ENST00000606089 416 ntBASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 AL022326.1-202ENST00000641533 845 ntBASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRGV10A0A0A0MS01 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRGV10A0A0A0MS01 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms