Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 AC008040.2-201ENST00000461049 708 ntBASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IPQ96QF0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 AC026271.3-201ENST00000571884 352 ntBASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 AC130371.2-201ENST00000619443 611 ntBASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 KRT8P47-201ENST00000604727 1398 ntBASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3IPQ96QF0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms