Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCE1P61221 HBZP1-201ENST00000354915 429 ntBASIC16.9■□□□□ 0.3
ABCE1P61221 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 ATP5G1P1-201ENST00000448724 379 ntBASIC16.9■□□□□ 0.3
ABCE1P61221 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.9■□□□□ 0.3
ABCE1P61221 STK25P1-201ENST00000585406 838 ntBASIC16.9■□□□□ 0.3
ABCE1P61221 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCE1P61221 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCE1P61221 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCE1P61221 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
ABCE1P61221 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCE1P61221 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCE1P61221 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ABCE1P61221 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ABCE1P61221 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ABCE1P61221 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCE1P61221 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCE1P61221 AC103564.2-201ENST00000432853 1299 ntBASIC16.89■□□□□ 0.29
ABCE1P61221 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ABCE1P61221 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.89■□□□□ 0.29
ABCE1P61221 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 TMEM191A-211ENST00000637163 1067 ntBASIC16.89■□□□□ 0.29
ABCE1P61221 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ABCE1P61221 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.89■□□□□ 0.29
ABCE1P61221 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
ABCE1P61221 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCE1P61221 Z83836.1-201ENST00000624605 1642 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 HLA-A-202ENST00000376806 1854 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 KRT8P10-201ENST00000450021 1447 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 AL135999.2-201ENST00000622438 1686 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ABCE1P61221 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCE1P61221 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
ABCE1P61221 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ABCE1P61221 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 RNF126P1-202ENST00000569893 925 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.88■□□□□ 0.29
ABCE1P61221 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCE1P61221 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCE1P61221 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.88■□□□□ 0.29
ABCE1P61221 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCE1P61221 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms