Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.33■□□□□ 0.04
GBX2P52951 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.33■□□□□ 0.04
GBX2P52951 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 AL031432.5-201ENST00000641059 760 ntBASIC15.33■□□□□ 0.04
GBX2P52951 AP006294.2-201ENST00000641667 209 ntBASIC15.33■□□□□ 0.04
GBX2P52951 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 AC068587.6-202ENST00000641839 5619 ntBASIC15.33■□□□□ 0.04
GBX2P52951 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 KRT18P22-201ENST00000402024 1347 ntBASIC15.33■□□□□ 0.04
GBX2P52951 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GBX2P52951 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GBX2P52951 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GBX2P52951 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.32■□□□□ 0.04
GBX2P52951 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 AC010460.3-201ENST00000511359 1579 ntBASIC15.32■□□□□ 0.04
GBX2P52951 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.32■□□□□ 0.04
GBX2P52951 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GBX2P52951 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
GBX2P52951 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.31■□□□□ 0.04
GBX2P52951 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GBX2P52951 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
GBX2P52951 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 AC005052.1-201ENST00000625181 2492 ntBASIC15.31■□□□□ 0.04
GBX2P52951 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GBX2P52951 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 TSPY15P-201ENST00000457163 923 ntBASIC15.31■□□□□ 0.04
GBX2P52951 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GBX2P52951 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.31■□□□□ 0.04
GBX2P52951 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms