Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL11A1P12107 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL11A1P12107 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL11A1P12107 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL11A1P12107 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL11A1P12107 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.23■□□□□ 0.67
COL11A1P12107 PRYP6-201ENST00000514804 343 ntBASIC19.23■□□□□ 0.67
COL11A1P12107 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.23■□□□□ 0.67
COL11A1P12107 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.23■□□□□ 0.67
COL11A1P12107 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL11A1P12107 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 AC142381.1-201ENST00000426099 345 ntBASIC19.23■□□□□ 0.67
COL11A1P12107 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.23■□□□□ 0.67
COL11A1P12107 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.23■□□□□ 0.67
COL11A1P12107 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.23■□□□□ 0.67
COL11A1P12107 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COL11A1P12107 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL11A1P12107 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.22■□□□□ 0.67
COL11A1P12107 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.22■□□□□ 0.67
COL11A1P12107 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL11A1P12107 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.22■□□□□ 0.67
COL11A1P12107 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.22■□□□□ 0.67
COL11A1P12107 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.22■□□□□ 0.67
COL11A1P12107 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.22■□□□□ 0.67
COL11A1P12107 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.22■□□□□ 0.67
COL11A1P12107 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.22■□□□□ 0.67
COL11A1P12107 AC097493.3-201ENST00000509725 367 ntBASIC19.22■□□□□ 0.67
COL11A1P12107 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.22■□□□□ 0.67
COL11A1P12107 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 RN7SL204P-201ENST00000582831 262 ntBASIC19.22■□□□□ 0.67
COL11A1P12107 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL11A1P12107 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
COL11A1P12107 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.22■□□□□ 0.67
COL11A1P12107 TOP3BP1-201ENST00000420768 1380 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
COL11A1P12107 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.21■□□□□ 0.67
COL11A1P12107 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.21■□□□□ 0.67
COL11A1P12107 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.21■□□□□ 0.67
COL11A1P12107 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL11A1P12107 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.21■□□□□ 0.67
COL11A1P12107 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 TSPY16P-201ENST00000449843 468 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 BANF1P1-201ENST00000553684 263 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 MIR4453-201ENST00000584019 89 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 AC100757.3-201ENST00000622361 1406 ntBASIC19.21■□□□□ 0.67
COL11A1P12107 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL11A1P12107 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.21■□□□□ 0.67
COL11A1P12107 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL11A1P12107 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.21■□□□□ 0.67
COL11A1P12107 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.21■□□□□ 0.67
COL11A1P12107 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.21■□□□□ 0.67
COL11A1P12107 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms