Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 AK4P3-201ENST00000418260 669 ntBASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 HBZP1-201ENST00000354915 429 ntBASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 AC068472.1-201ENST00000474589 881 ntBASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 AC092171.3-201ENST00000610122 2651 ntBASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 AC073508.3-201ENST00000619697 1419 ntBASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB4Q9UN71 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 AC112907.2-201ENST00000448639 330 ntBASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 AC005332.3-201ENST00000589904 676 ntBASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB4Q9UN71 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms