Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 HNRNPDP1-201ENST00000439535 754 ntBASIC17.58■□□□□ 0.4
SP110Q9HB58 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.58■□□□□ 0.4
SP110Q9HB58 AC009078.2-202ENST00000463353 338 ntBASIC17.58■□□□□ 0.4
SP110Q9HB58 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 AL662844.1-201ENST00000546340 181 ntBASIC17.58■□□□□ 0.4
SP110Q9HB58 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.58■□□□□ 0.4
SP110Q9HB58 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SP110Q9HB58 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SP110Q9HB58 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SP110Q9HB58 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.58■□□□□ 0.4
SP110Q9HB58 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SP110Q9HB58 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SP110Q9HB58 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SP110Q9HB58 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SP110Q9HB58 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SP110Q9HB58 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SP110Q9HB58 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SP110Q9HB58 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.57■□□□□ 0.4
SP110Q9HB58 GPR89P-201ENST00000407924 1495 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SP110Q9HB58 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.57■□□□□ 0.4
SP110Q9HB58 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SP110Q9HB58 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.57■□□□□ 0.4
SP110Q9HB58 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.57■□□□□ 0.4
SP110Q9HB58 AL031284.1-201ENST00000419297 478 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.57■□□□□ 0.4
SP110Q9HB58 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.57■□□□□ 0.4
SP110Q9HB58 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.57■□□□□ 0.4
SP110Q9HB58 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.57■□□□□ 0.4
SP110Q9HB58 SLC25A6P4-201ENST00000586535 553 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SP110Q9HB58 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 MIR1199-201ENST00000621445 119 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.57■□□□□ 0.4
SP110Q9HB58 AC008735.5-201ENST00000623544 497 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 FAM215A-202ENST00000632077 792 ntBASIC17.57■□□□□ 0.4
SP110Q9HB58 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
SP110Q9HB58 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
SP110Q9HB58 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SP110Q9HB58 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SP110Q9HB58 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 AL590787.1-201ENST00000568856 1315 ntBASIC17.56■□□□□ 0.4
SP110Q9HB58 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 AC093909.1-201ENST00000504731 1122 ntBASIC17.56■□□□□ 0.4
SP110Q9HB58 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 AP001005.1-201ENST00000571755 1248 ntBASIC17.56■□□□□ 0.4
SP110Q9HB58 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.56■□□□□ 0.4
SP110Q9HB58 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.56■□□□□ 0.4
SP110Q9HB58 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SP110Q9HB58 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SP110Q9HB58 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SP110Q9HB58 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.56■□□□□ 0.4
SP110Q9HB58 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SP110Q9HB58 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SP110Q9HB58 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
SP110Q9HB58 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms