Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ECEL1P3-201ENST00000427961 737 ntBASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 AC068472.1-201ENST00000474589 881 ntBASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A15Q8N5U1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 MIR718-201ENST00000390190 70 ntBASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 ECEL1P2-202ENST00000465689 757 ntBASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 NAPSB-206ENST00000562112 1266 ntBASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 FAM87A-204ENST00000613235 858 ntBASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A15Q8N5U1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 RASA4DP-201ENST00000460726 1199 ntBASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 AC098590.1-201ENST00000468126 897 ntBASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 GCSHP2-201ENST00000560971 527 ntBASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A15Q8N5U1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 362.3 ms