Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 RNF126P1-202ENST00000569893 925 ntBASIC15.31■□□□□ 0.04
LRRC28Q86X40 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.31■□□□□ 0.04
LRRC28Q86X40 AC093458.2-201ENST00000623150 629 ntBASIC15.31■□□□□ 0.04
LRRC28Q86X40 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC28Q86X40 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 LYSMD4-203ENST00000378904 2122 ntBASIC15.31■□□□□ 0.04
LRRC28Q86X40 AC007950.2-201ENST00000615045 2347 ntBASIC15.31■□□□□ 0.04
LRRC28Q86X40 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC28Q86X40 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TSPY22P-201ENST00000427496 604 ntBASIC15.3■□□□□ 0.04
LRRC28Q86X40 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 AC005332.3-201ENST00000589904 676 ntBASIC15.3■□□□□ 0.04
LRRC28Q86X40 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms