Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFX1Q12986 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NFX1Q12986 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.85■□□□□ 0.61
NFX1Q12986 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.85■□□□□ 0.61
NFX1Q12986 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 LINC01451-201ENST00000623792 534 ntBASIC18.85■□□□□ 0.61
NFX1Q12986 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NFX1Q12986 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.85■□□□□ 0.61
NFX1Q12986 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFX1Q12986 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NFX1Q12986 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.84■□□□□ 0.61
NFX1Q12986 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.84■□□□□ 0.61
NFX1Q12986 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
NFX1Q12986 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.84■□□□□ 0.61
NFX1Q12986 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.84■□□□□ 0.61
NFX1Q12986 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
NFX1Q12986 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NFX1Q12986 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NFX1Q12986 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.84■□□□□ 0.61
NFX1Q12986 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFX1Q12986 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFX1Q12986 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NFX1Q12986 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.83■□□□□ 0.61
NFX1Q12986 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NFX1Q12986 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFX1Q12986 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFX1Q12986 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NFX1Q12986 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.83■□□□□ 0.61
NFX1Q12986 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
NFX1Q12986 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NFX1Q12986 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.83■□□□□ 0.6
NFX1Q12986 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.83■□□□□ 0.6
NFX1Q12986 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.83■□□□□ 0.6
NFX1Q12986 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.83■□□□□ 0.6
NFX1Q12986 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.83■□□□□ 0.6
NFX1Q12986 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.83■□□□□ 0.6
NFX1Q12986 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
NFX1Q12986 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFX1Q12986 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.82■□□□□ 0.6
NFX1Q12986 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.82■□□□□ 0.6
NFX1Q12986 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.82■□□□□ 0.6
NFX1Q12986 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.82■□□□□ 0.6
NFX1Q12986 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.82■□□□□ 0.6
NFX1Q12986 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.82■□□□□ 0.6
NFX1Q12986 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.82■□□□□ 0.6
NFX1Q12986 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms