Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 AL645728.1-201ENST00000366221 2101 ntBASIC13.54□□□□□ -0.24
CCL20P78556 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 MESTP1-201ENST00000404287 994 ntBASIC13.54□□□□□ -0.24
CCL20P78556 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL20P78556 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL20P78556 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL20P78556 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL20P78556 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL20P78556 AC010240.3-201ENST00000607688 395 ntBASIC13.54□□□□□ -0.24
CCL20P78556 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 AC096733.2-201ENST00000609937 1394 ntBASIC13.54□□□□□ -0.24
CCL20P78556 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 AL603832.2-201ENST00000566195 2125 ntBASIC13.54□□□□□ -0.24
CCL20P78556 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL20P78556 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL20P78556 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL20P78556 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 AC022532.1-201ENST00000624563 1728 ntBASIC13.53□□□□□ -0.24
CCL20P78556 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 ME2P1-201ENST00000426028 1970 ntBASIC13.53□□□□□ -0.24
CCL20P78556 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.53□□□□□ -0.24
CCL20P78556 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 CR769767.2-201ENST00000622735 460 ntBASIC13.53□□□□□ -0.24
CCL20P78556 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCL20P78556 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL20P78556 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CCL20P78556 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.52□□□□□ -0.24
CCL20P78556 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.52□□□□□ -0.24
CCL20P78556 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CCL20P78556 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.52□□□□□ -0.24
CCL20P78556 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms